The firm's chairwoman and 14 other people were arrested in connection with the scandal in July, while a slew of national, provincial and local officials have been sacked.
The manufacturer of rabies vaccines was ordered to cease production after it was found to have fabricated records.
Authorities say the suspect rabies vaccines did not enter the market. But the case provoked outrage from consumers fed up with recurring product-safety scandals, particularly in the drug sector.
The company was handed a fine and asset seizure totalling 9.1 billion yuan ($1.3 billion), the China National Drug Administration (CNDA) Jilin Food and Drug Administration said Tuesday.
The amount includes the forfeiture of 1.89 billion yuan in revenue from the sale of the vaccine.